Publicaciones Genómica

ARTÍCULOS CIENTÍFICOS (últimos 5 años)

  1. Ramírez-Tejero, J. A.; Gómez-Lama Cabanás, C.; Valverde-Corredor, A.; Mercado-Blanco, J.; F. Luque (2020) Epigenetics regulation of Verticillium dahliae virulence: Does DNA methylation level play a role? International Journal of Molecular Sciences,  21, 5197; doi:10.3390/ijms21155197.Q1. Ver
  2. Faize, M., Fumanal, B., Luque, F., Ramírez-Tejero, J. A., Zou, Z., Qiao, X., Faize, L., Gousset-Dupont, A., Roeckel-Drevet, P., Label, P., Venisse, J-S. (2020). Genome wild analysis and molecular understanding of the aquaporin diversity in Olive trees (Olea europaea) International Journal of Molecular Sciences, 21, 4183; doi:10.3390/ijms21114183. Cuartil: Q1
  3. Verónica Martínez-Fernández,Abel Cuevas-Bermúdez, Francisco Gutiérrez-Santiago, Ana I. Garrido-Godino, Olga Rodríguez-Galán, Antonio Jordán-Pla, Sergio Lois, Juan C. Triviño, Jesús de la Cruz, and Francisco Navarro (2020). Prefoldin-like Bud27 influences the transcription of ribosomal components and ribosome biogenesis in Saccharomyces cerevisiae. RNA (doi: 10.1261/rna.075507.120.).Q1
  4. Ramírez-Tejero, J. A.; Jiménez-Ruiz, J.; Leyva-Pérez, M. de la O.;Barroso, J. B.; Luque F.(2020) Gene expression pattern in olive tree organs (Olea europaea). Genes, 11, 544; doi:10.3390/genes11050544. Q2
  5. Jiménez-Ruiz, J.; Ramírez-Tejero, J.A.; Fernández-Pozo, N.; Leyva-Pérez, M. de la O.; Yan, H.; de la Rosa, R.; Belaj, A.; Montes, E.; Rodríguez-Ariza, M.O.; Navarro, F.; Barroso, J.B.; Beuzón, C.R.; Valpuesta, V.; Bombarely, A.; Luque F. (2020) Transposon Activation is a Major Driver in the Genome Evolution of Cultivated Olive Trees (Olea europaea). The Plant Genome, e20010. https://doi.org/10.1002/tpg2.20010. Q1
  6. Jiménez, M. de la O Leyva, C. Gómez-Lama, J. B. Barroso, F. Luque, J. Mercado (2019) The transcriptome of Verticillium dahliaeresponds differentially depending on the disease susceptibility level of the olive (Olea europaeaL.) cultivar. Genes, 10: 251. Q2
  7. Cuevas-Bermúdez, A., Garrido-Godino, A. I., Gutiérrez-Santiago, F. and Navarro, F. (2020). A Yeast Chromatin-enriched Fractions Purification Approach, yChEFs, from Saccharomyces cerevisiae. Bio-protocol10(1): e3471.DOI: 10.21769/BioProtoc.3471. Q1
  8. Begley, Victoria; Corzo, Daniel; Jordán-Pla, Antonio,; Cuevas-Bermúdez, Abel; de Miguel, Maria; Pérez-Aguado, David; Machuca-Ostos, Mercedes; Navarro,Francisco;Chávez, María; Pérez-Ortín, José; Chavez, Sebastian (2019). The mRNA degradation factor Xrn1 regulates transcription elongation in parallel to Ccr4. Nucleic Acids Research. doi:10.1093/nar/gkz660. Q1
  9. Cuevas-Bermúdez A, Garrido-Godino AI and Navarro F(2019). A novel yeast chromatin-enriched fractions purification approach, yChEFs, for the chromatin-associated protein analysis used for chromatin-associated and RNA-dependent chromatin-associated proteome studies from Saccharomyces cerevisiae. Gene Reports, 16. doi: 10.1016/j.genrep.2019.100450.
  10. J. Jiménez-Ruíz; Leyva-Pérez, María De La O; C. Gómez-Lama; Barroso-Albarracín, Juan Bautista; Luque, Francisco; J. Mercado (2019). ‘The transcriptome of Verticillium dahliaeresponds differentially depending on the disease susceptibility level of the olive (Olea europaeaL.) cultivar’. Genes, 10: 251, DOI: [10.3390/genes10040251], ISSN: 2073-4425, Cuartil: Q1.
  11. Martinez-Fernandez, V., A. I. Garrido-Godino, Cuevas-Bermúdez A. and Navarro F.(2018). The Yeast Prefoldin Bud27. Advances in Experimental Medicine and Biology. 1106:109-118. doi: 10.1007/978-3-030-00737-9_8. Q2
  12. Verónica Martínez-Fernández and Francisco Navarro (2018) Rpb5, a subunit shared by the eukaryotic RNA polymerases cooperates with the prefoldin-like Bud27/URI. AIMS Genetics,  5(1): 63-74. doi: 10.3934/genet.2018.1.63. Q3
  13. Verónica Martínez-Fernández, Ana Isabel Garrido-Godino1, María Carmen Mirón-García, Victoria Begley, Antonio Fernández-Pévida , Jesús de la Cruz, Sebastián Chávez, and Francisco Navarro (2018). Rpb5 modulates the RNA polymerase II transition from initiation to elongation by influencing Spt5 association and backtracking. Biochimica et Biophysica Acta (BBA) – Gene Regulatory Mechanisms   1861(1):1-13. doi: 10.1016/j.bbagrm.2017.11.002. Q1
  14. Martínez-Fernández; Navarro, Francisco (2018). ‘Rpb5, a subunit shared by the eukaryotic RNA polymerases cooperates with the prefoldin-like Bud27/URI’. AIMS Genetics, 5(1): 63-74, DOI: [10.3934/genet.2018.1.63], Cuartil: Q1.
  15. Martínez-Fernández; A.I. Garrido; M.C. Mirón-García; V. Begley; A. Fernández-Pévida; J. De La Cruz; S. Chávez; Navarro, Francisco (2018). ‘Rpb5 modulates the RNA polymerase II transition from initiation to elongation by influencing Spt5 association and backtracking’. Biochimica et Biophysica Acta (BBA) – Gene Regulatory Mechanisms, 1861(1): 1-13, DOI: [10.1016/j.bbagrm.2017.11.002], Cuartil: Q1.
  16. Leyva-Pérez, María De La O; J. Jiménez; C. Gómez-Lama; A. Valverde; Barroso-Albarracín; Juan Bautista; Luque, Francisco; J. Mercado (2018). ‘Tolerance of olive (Olea europaea) cv ‘Frantoio’ to Verticillium dahliaerelies on both basal and pathogen-induced differential transcriptomic responses’. New Phytologist, 217: 671-686, DOI: [10.1111/nph.14833], Cuartil: Q1.
  17. Jiménez-Ruíz; Leyva-Pérez, María De La O; I. Vidoy-Mercado; A. Barceló-Muñoz; Luque, Francisco(2018).‘Transcriptomic time-series analysis of early development in olive from seed to juvenile tree’. BMC Genomics, 19(824), Cuartil: Q1.
  18. Jiménez; Leyva-Pérez, María De La O; E. Schilirò; Barroso-Albarracín; Juan Bautista; A. Bombarely; L. Mueller; J. Mercado; Luque, Francisco (2017).‘Transcriptomic analysis of the Olea europaeaL. roots during the Verticillium dahliaeearly infection process’. The Plant Genome, 10(1): 1-15, DOI: [10.3835/plantgenome2016.07.0060], ISSN: 1940-3372, Cuartil:Q1.
  19. Martínez-Fernández; A.I. Garrido-Godino; M.C. Mirón-García; V.S. Begley; A. Fernández-Pevida; J. Cruz-Díaz; S. Chavez-De Diego; Navarro, Francisco(2017), ‘Rpb5 modulates the RNA polymerase II transition from initiation to elongation by influencing Spt5 association and backtracking’. Biochimica et Biophysica Acta: Gene Regulatory Mechanisms, 1861(1): 1-13, Cuartil:Q1.
  20. I. Garrido; M.C. García; J. García; V. Pelechano; D. Medina; J.E. Pérez; Navarro, Francisco (2016). ‘Rpb1 foot mutations demonstrate a major role of Rpb4 in mRNA stability during stress situations in yeast’. Biochimica et Biophysica Acta (BBA) – Gene Regulatory Mechanisms, 1859(5): 731-743, DOI: [10.1016/j.bbagrm.2016.03.008], ISSN: 1874-9399, Cuartil: Q1.
  21. Leterrier; Barroso-Albarracín; Juan Bautista; Valderrama-Rodríguez; Raquel; Begara-Morales; Juan Carlos; B. Sánchez-Calvo; Chaki-; Mounira; Luque, Francisco; B. Viñegla; J.M. Palma; F.J. Corpas (2016).‘Peroxisomal NADP-isocitrate dehydrogenase is required for Arabidopsisstomatal movement’. Protoplasma, 253: 403-415, DOI: [10.1007/s00709-015-0819-0], Cuartil: Q1.
  22. J. González; I. Ortiz; A. Muñoz; C. García; J.F. Sánchez; Luque, Francisco; O. Trelles; E. Rodríguez; R. De La Rosa; V. Valpuesta; C. Beuzón (2016).‘Transcriptomic analysis using olive varieties and breeding progenies identify candidate genes involved in plant architecture’. Frontiers in Plant Science, 7(240): 1-21, DOI: [10.3389/fpls.2016.00240], Cuartil: Q1.
  23. Mata-Pérez, Capilla; B. Sánchez-Calvo; Padilla-Serrano, María De Las Nieves; Begara-Morales, Juan Carlos; Luque, Francisco; M. Melguizo; J. Jiménez; J. Fierro; J.C. Domínguez; A. Peñas; Valderrama-Rodríguez, Raquel; F.J. Corpas; Barroso-Albarracín, Juan Bautista (2016).‘Nitro-fatty acids in plant signaling: nitro-linolenic acid induces the molecular chaperone network in Arabidopsis’. Plant Physiology, 170(2): 686-701, DOI: [10.1104/pp.15.01671], Cuartil:Q1
  24. Mata-Pérez, Capilla; Begara-Morales, Juan Carlos; Luque, Francisco; Padilla-Serrano, María De Las Nieves; J. Jiménez-Ruíz; B. Sánchez-Calvo; J. Fierro-Risco; Barroso-Albarracín, Juan Bautista (2016).‘Transcriptomic analyses on the role of nitric oxide in plant disease resistance’. Current Issues in Molecular Biology, 19: 121-128, Cuartil:Q1
  25. Hernández; D. Franco; A.E. Aránega; Navarro, Francisco (2015). ‘Expression patterns and immunohistochemical localization of PITX2B transcription factor in the developing mouse heart’. The International Journal of Developmental Biology, 59(4-6): 247-254, DOI: [10.1387/ijdb.140224fh], ISSN: 1696-3547, Cuartil: Q3.
  26. Mata-Pérez, Capilla; Begara-Morales, Juan Carlos; Luque, Francisco; Padilla-Serrano, María De Las Nieves; J. Jiménez; B. Sánchez-Calvo; J. Fierro; Barroso-Albarracín, Juan Bautista (2015). ‘Transcriptomic analyses on the role of nitric oxide in plant disease resistance’. Current Issues in Molecular Biology, 19: 121-128, ISSN: 1467-3037, Cuartil: Q1.
  27. Jiménez; M.C. García; I. Vidoy; Leyva-Pérez, María De La O; A. Fernández; Barroso-Albarracín, Juan Bautista; A. Barceló; C.R. Beuzón; R. De La Rosa; Luque, Francisco (2015).‘Transcriptional analysis of adult cutting and juvenile seedling olive roots’. Tree Genetics & Genomes, 11: 77-88, DOI: [10.1007/s11295-015-0898-2], Cuartil: Q3.
  28. Begara-Morales, Juan Carlos; B. Sánchez-Calvo; Chaki-, Mounira; Mata-Pérez, Capilla; Valderrama-Rodríguez, Raquel; J. López; Luque, Francisco; F.J. Corpas; Barroso-Albarracín, Juan Bautista (2015).‘Differential molecular response of monodehydroascorbate reductase (MDAR) and glutathione reductase (GR) to nitric oxide post-translational modifications caused by nitration and S-nitrosylation’. Journal of Experimental Botany, 66(19): 5983-5996, DOI: [10.1093/jxb/erv306], Cuartil:Q1.
  29. Mata-Pérez, Capilla; B. Sánchez-Calvo; Begara-Morales, Juan Carlos; Luque, Francisco; J. Jiménez; F.J. Corpas; Barroso-Albarracín, Juan Bautista (2015). ‘Transcriptomic profiling of linolenic acid-responsive genes in ROS signalling from RNA-seq data in Arabidopsis’. Frontiers in Plant Science, 6(122): 1-14, DOI: [10.3389/fpls.2015.00122], Cuartil:Q1.
  30. Leyva-Pérez, María De La O; A. Valverde; Valderrama-Rodríguez, Raquel; J. Jiménez; A. Muñoz; O. Trelles; Barroso-Albarracín, Juan Bautista; J. Mercado; Luque, Francisco (2015). ‘Early and delayed long-term transcriptional changes and short-term transient responses during cold acclimation in olive leaves’. DNA Research, 22(1): 1-11, DOI: [10.1093/dnares/dsu033], Cuartil:Q1.
  31. Angulo;Leyva-Pérez, María De La O; I. Finiti; J. López-Cruz; E. Fernández-Crespo; P. García-agustin; C. González-Bosch(2015).‘Role of dioxygenase alpha-DOX2 and SA in basal response and in hexanoic acid- induced resistance of tomato (Solanum lycopersicum) plants against Botrytis cinerea’. Journal of Plant Physiology, 175: 163-173, Cuartil:Q2.

LIBROS Y CAPÍTULOS DE LIBROS

  1. Jiménez-Ruíz; C. Gómez-Lama; J. Mercado-Blanco; Luque, Francisco.2019. Biología y métodos de detección de la verticilosis del olivo. En: Biología Molecular y Celular. Volumen I. Técnicas y Fundamentos, pp. 165-207.
  2. Cuevas-Bermúdez; V. Martínez-Fernández; A.I. Garrido-Godino; Navarro, Francisco. 2019. Subunidades comunes de las RNA polimerasas eucariotas. En: Biología Molecular y Celular. Volumen I: Técnicas y fundamentos, pp. 73-91. UJA Editorial, Jaén.
  3. Martínez-Fernández; A.I. Garrido-Godino; A. Cuevas-Bermúdez; Navarro, Francisco. 2018. ‘The yeast prefoldin bud27’. En: ‘Prefoldins: The New Chaperones, Advances in Experimental Medicine and Biology’, pp. 109-118. Springer Nature. ISBN:978-3-030-00737-9
  4. Cuevas-Bermúdez; V. Martínez-Fernández; A.I. Garrido-Godino; Navarro, Francisco. 2017. ‘Subunits Common to RNA Polymerases’. En: ‘Yeast – Biomedical Applications’, pp. 151-165. Andreas Eberhard – INTECH.
  5. Mata-Pérez, Capilla; B. Sánchez-Calvo; Begara-Morales, Juan Carlos; Luque, Francisco; J. Jiménez-Ruíz; J. Fierro-Risco; Padilla-Serrano, María De Las Nieves; Valderrama-Rodríguez, Raquel; A.M. Fernández-Ocaña; F.J. Corpas-Aguirre; Barroso-Albarracín, Juan Bautista. 2017. ‘Transcriptomic profiling of linolenic acid-responsive genes in ROS signaling from RNAseq data in Arabidopsis’. En: ‘ROS Regulation During Abiotic Stress Plant Responses’, pp. 290-303. Frontiers Research Topics.
  6. Martínez-Fernández; A.I. Garrido-Godino; A. Cuevas-Bermúdez; Navarro, Francisco. 2015. ‘Cytoplasmic and nuclear functions for the prefoldin-like URI/Bud27’. En: ‘New Research on Molecular Chaperones’. Nova Science Publishers.

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